Introduction to pathway enrichment (II)
This post is the second part of this one. We will use the same running example on epileptic mice exposed to a CSF1R inhibitor. In the previous post, one appr...
Tag
- drug repurposing 8
- collaborative filtering 6
- Python 3
- open science 3
- reproducibility 3
- interpretability 2
- research project 1
- dataset 1
- science replication 1
- positive-unlabeled learning 1
- genomics 1
- overrepresentation analysis 1
- gene set enrichment analysis 1
drug repurposing
Introduction to pathway enrichment (I)
The second chapter of the RECeSS project aims at providing interpretable classification (into positive and negative associations) of drug-disease pairs. But ...
We released our first paper!
We are glad to announce that our first (tool) paper has been accepted at Journal of Open Source Software !
Introduction to PU learning
Drug repurposing is a paradigm for drug development, where drug discovery focuses on already commercialized molecules. The key idea is that if those molecule...
Release of the benchscofi package
The Python package benchscofi for the benchmark of collaborative filtering-based approaches to drug repurposing is out!
Release of the stanscofi package
We introduce our Python package stanscofi for the development of collaborative filtering-based drug repurposing algorithms!
New drug repurposing datasets
We are really excited to present the first two drug repurposing datasets for collaborative filtering produced during the RECeSS project!
Launch of the RECeSS project website!
We are pleased to launch the blog associated with the Robust Explainable Controllable Standard for drug Screening (RECeSS) project!
collaborative filtering
We released our first paper!
We are glad to announce that our first (tool) paper has been accepted at Journal of Open Source Software !
Introduction to PU learning
Drug repurposing is a paradigm for drug development, where drug discovery focuses on already commercialized molecules. The key idea is that if those molecule...
Release of the benchscofi package
The Python package benchscofi for the benchmark of collaborative filtering-based approaches to drug repurposing is out!
Release of the stanscofi package
We introduce our Python package stanscofi for the development of collaborative filtering-based drug repurposing algorithms!
New drug repurposing datasets
We are really excited to present the first two drug repurposing datasets for collaborative filtering produced during the RECeSS project!
Launch of the RECeSS project website!
We are pleased to launch the blog associated with the Robust Explainable Controllable Standard for drug Screening (RECeSS) project!
Python
We released our first paper!
We are glad to announce that our first (tool) paper has been accepted at Journal of Open Source Software !
Release of the benchscofi package
The Python package benchscofi for the benchmark of collaborative filtering-based approaches to drug repurposing is out!
Release of the stanscofi package
We introduce our Python package stanscofi for the development of collaborative filtering-based drug repurposing algorithms!
open science
We released our first paper!
We are glad to announce that our first (tool) paper has been accepted at Journal of Open Source Software !
Release of the benchscofi package
The Python package benchscofi for the benchmark of collaborative filtering-based approaches to drug repurposing is out!
Release of the stanscofi package
We introduce our Python package stanscofi for the development of collaborative filtering-based drug repurposing algorithms!
reproducibility
We released our first paper!
We are glad to announce that our first (tool) paper has been accepted at Journal of Open Source Software !
Release of the benchscofi package
The Python package benchscofi for the benchmark of collaborative filtering-based approaches to drug repurposing is out!
Release of the stanscofi package
We introduce our Python package stanscofi for the development of collaborative filtering-based drug repurposing algorithms!
interpretability
Introduction to pathway enrichment (II)
This post is the second part of this one. We will use the same running example on epileptic mice exposed to a CSF1R inhibitor. In the previous post, one appr...
Introduction to pathway enrichment (I)
The second chapter of the RECeSS project aims at providing interpretable classification (into positive and negative associations) of drug-disease pairs. But ...
research project
Launch of the RECeSS project website!
We are pleased to launch the blog associated with the Robust Explainable Controllable Standard for drug Screening (RECeSS) project!
dataset
New drug repurposing datasets
We are really excited to present the first two drug repurposing datasets for collaborative filtering produced during the RECeSS project!
science replication
New drug repurposing datasets
We are really excited to present the first two drug repurposing datasets for collaborative filtering produced during the RECeSS project!
positive-unlabeled learning
Introduction to PU learning
Drug repurposing is a paradigm for drug development, where drug discovery focuses on already commercialized molecules. The key idea is that if those molecule...
genomics
Introduction to pathway enrichment (I)
The second chapter of the RECeSS project aims at providing interpretable classification (into positive and negative associations) of drug-disease pairs. But ...
overrepresentation analysis
Introduction to pathway enrichment (I)
The second chapter of the RECeSS project aims at providing interpretable classification (into positive and negative associations) of drug-disease pairs. But ...
gene set enrichment analysis
Introduction to pathway enrichment (II)
This post is the second part of this one. We will use the same running example on epileptic mice exposed to a CSF1R inhibitor. In the previous post, one appr...